Export the pdfs fitted for the different taxa.

export_pdfs(
  x,
  dataname = x$misc$site_info$site_name,
  climate = x$parameters$climate,
  taxa = x$inputs$taxa.name,
  loc = getwd(),
  as.csv = FALSE
)

Arguments

x: The name, age or depth of the rows of df (the samples).
dataname: The name of the site (default: x$misc$site_info$site_name)
climate: A vector of the climate variables to extract. See accClimateVariables for the list of accepted values.
taxa: The names of the taxa of interest. All the pdfs are saved by default.
loc: The path where to export the data (default: working directory)
as.csv: Boolean to indicate if the data should be exported as csv (TRUE) or xlsx (FALSE, default)

Value

No return value, function called to export the PDFs as files.

Examples

if (FALSE) {
  data(crest_ex)
  data(crest_ex_pse)
  data(crest_ex_selection)
  reconstr <- crest(
    df = crest_ex, pse = crest_ex_pse, taxaType = 0,
    site_info = c(7.5, 7.5),
    climate = c("bio1", "bio12"), bin_width = c(2, 20),
    shape = c("normal", "lognormal"),
    selectedTaxa = crest_ex_selection, dbname = "crest_example",
    leave_one_out = TRUE
  )
  #> Replace 'tempdir()' by the location where the sample should be saved (e.g. 'getwd()')
  export_pdfs(reconstr,
              dataname='crest_example',
              loc=tempdir()
  )
}